This project is available under the MIT License with an Academic Citation Requirement. This means you can freely use, modify, and distribute the
Dgidb mcp server connects Dgidb to AI assistants that speak the Model Context Protocol. This project is available under the MIT License with an Academic Citation Requirement. This means you can freely use, modify, and distribute the code, but any academic or scientific publication that uses this software must provide appropriate attribution.
This project is available under the MIT License with an Academic Citation Requirement. This means you can freely use, modify, and distribute the code, but any academic or scientific publication that uses this software must provide appropriate attribution.
Essentially, this server gives Claude the "tool" it needs to look up information in the DGIdb.
Once connected, the assistant can call this tool directly:
DGIdb — ** A comprehensive database containing information about how drugs interact with genes. It gathers data from many different sourcesSetup follows the standard MCP pattern: clone or install the server, then register it in your client's configuration file and restart the client. The configuration snippets on this page cover Claude Desktop, Claude Code and Cursor.
Database servers turn schema archaeology and ad-hoc reporting into conversation, which is why they tend to be the second or third server people install. Dgidb sits in that group, and the shape of its toolset — DGIdb — tells you what it is really for. Worth comparing against the other databases servers in this directory before you commit to one, since several overlap in scope but differ sharply in setup cost and permissions.
| Tool | What it does |
|---|---|
| DGIdb | ** A comprehensive database containing information about how drugs interact with genes. It gathers data from many different sources. |
{
"mcpServers": {
// ... (other server configurations might be here) ...
"dgidb": {
"command": "npx",
"args": [
"mcp-remote",
"https://dgidb-mcp-server.quentincody.workers.dev/mcp" // <-- This URL needs to be the actual address of YOUR deployed DGIdb MCP server
]
}
// ... (other server configurations might be here) ...
}
}Configuration as documented by the project. Restart the client after saving.
Read-only SQL access to Postgres — let your assistant inspect schemas and answer questions from real data.
Manage your whole Supabase project in conversation — database, auth, storage, Edge Functions and branches.
Query, modify and analyse local SQLite databases in conversation — the fastest way to chat with a data file.
Metabase ships its own MCP endpoint — search your BI content, build and run queries, and save questions and dashboards without leaving the chat.
Official MongoDB server covering data, schemas and Atlas management — from find queries to spinning up clusters.
Serverless Postgres with database branching — point your assistant at Neon and let it work on disposable copies.