PubTator3 API compatible with the MCP agent protocol
PubTator3 API compatible with the MCP agent protocol
This project provides an async Python server for interacting with the PubTator3 API. It exposes multiple biomedical text-mining tools compatible with the MCP agent protocol, supporting tasks such as entity lookup, biomedical literature search, and text extraction from PubMed/PMC articles.
Compare MCP servers by category, or browse hosted MCP servers if you prefer an endpoint over a local process.
{
"mcpServers": {
"server-pubtator3": {
"command": "uvx",
"args": ["mcp-server-pubtator3"]
}
}
}Add to claude_desktop_config.json, then restart Claude Desktop.
Inspect PostgreSQL schemas and run read-only queries with the archived MCP reference server. Review its maintenance status before choosing it.
Connect the Notion MCP server to search workspace content and work with pages and databases through Notion’s hosted OAuth service.
Use the Supabase MCP server to inspect database schemas, query project data and retrieve docs through a project-scoped connection.
Query, modify and analyse local SQLite databases in conversation — the fastest way to chat with a data file.
Metabase ships its own MCP endpoint — search your BI content, build and run queries, and save questions and dashboards without leaving the chat.
Official MongoDB server covering data, schemas and Atlas management — from find queries to spinning up clusters.