Drive VMD for GROMACS/LAMMPS analysis + clathrate-hydrate cage science (needs a local VMD)
Vmd-hydrate-mcp is an MCP integration. Drive VMD for GROMACS/LAMMPS analysis + clathrate-hydrate cage science (needs a local VMD).
The published pypi package is vmd-hydrate-mcp, version 0.2.0. Its declared MCP transport is stdio.
Check the maintainer’s instructions for account access, authentication and the supported client configuration. Once connected, inspect the tools your client receives and try a small task that matches the server’s stated purpose. The registry description does not include a verified, complete tool list.
View the publisher’s registry entry · Project repository. This profile uses version 0.2.0 from the registry. Registration identifies the publisher namespace; it does not establish that this is a first-party integration for every service it connects.
Browse related developer tools MCP servers for tools that cover the same kind of work.
Inspect PostgreSQL schemas and run read-only queries with the archived MCP reference server. Review its maintenance status before choosing it.
Use Firecrawl MCP to retrieve website content and extract information for research through Firecrawl’s API-backed web tools.
Enables programmatic access to the IACR Cryptology ePrint Archive for efficient retrieval of cryptographic research papers.
Manage educational context based on courses, assignments, and exams using a knowledge graph.
MCP server with tools to search, fetch, analyze, and report on scientific papers and datasets.
Scholarly search: OpenAlex, Crossref, arXiv, OpenCitations and PubMed in one endpoint.