Musubix MCP Server

MUSUBIX Ontology Reasoning MCP - OWL 2 RL inference and SPARQL query

Local serverstdioTypeScript

What is the Musubix MCP server?

Musubix MCP server exists for a simple reason — assistants are far more useful when they can act on Musubix directly instead of describing what you should do. MUSUBIX Ontology Reasoning MCP - OWL 2 RL inference and SPARQL query.

What you get

MUSUBIX is an innovative AI coding system that integrates Neural (LLM) and Symbolic (Knowledge Graph) reasoning. It combines MUSUBI SDD methodology with Git-native knowledge management to support high-quality software development.

  • 🧠 Neuro-Symbolic Integration - Fusion of LLM creativity and knowledge graph precision
  • 📂 Git-Native Knowledge - File-based knowledge graph management (v3.0.0)
  • 📊 DFG/CFG Analysis - Data flow and control flow graph extraction for TypeScript/JavaScript
  • 🧮 Lean 4 Integration - Formal theorem proving with EARS-to-Lean conversion
  • 📚 Library Learning - DreamCoder-style hierarchical abstraction and pattern compression
  • 🔍 Neural Search - Neural-guided program synthesis with beam search

What the assistant can call

Once Musubix is connected, these are the calls the assistant has available:

  • pattern_extract — Extract patterns from code
  • pattern_compress — Abstraction and compression of patterns
  • pattern_store — Save to pattern library
  • pattern_query — Search and retrieve patterns
  • pattern_consolidate — Consolidate similar patterns
  • ontology_query — Query ontology graph
  • ontology_infer — Execute ontology-based inference
  • Features — The Features tool exposed by this server

Configuration and credentials

  • Node.js >= 20.0.0 - npm >= 10.0.0 - TypeScript >= 5.3

Setting it up

Installation goes through your MCP client rather than a global install: point it at npx on npm and it is fetched when the client starts. The copy-paste blocks for Claude Desktop, Claude Code and Cursor are further down this page.

Choosing this one

Among the knowledge and memory options, the useful question is rarely "what can it do" but "what does it cost you to run" — permissions, credentials, and how much of your context its toolset consumes. Musubix's toolset — pattern_extract, pattern_compress, pattern_store and 5 more — is a fair guide to whether it matches your workflow. It is maintained by nahisaho; worth a glance at recent repository activity before you build anything load-bearing on it.

SyncDev reviews every entry in this directory against the project's own documentation before publishing, and revisits them as servers change.

Before you rely on it

  • It runs with your machine's permissions. That is convenient and also the reason to think about what you point it at before you approve a tool call.
  • MCP clients confirm each tool call by default. Leave that on until you have watched what the musubix mcp server does with a few real requests.

Available tools

ToolWhat it does
pattern_extractExtract patterns from code
pattern_compressAbstraction and compression of patterns
pattern_storeSave to pattern library
pattern_querySearch and retrieve patterns
pattern_consolidateConsolidate similar patterns
ontology_queryQuery ontology graph
ontology_inferExecute ontology-based inference
FeaturesThe Features tool exposed by this server.

How to install the Musubix MCP server

{
  "mcpServers": {
    "ontology": {
      "command": "npx",
      "args": ["-y", "npx"]
    }
  }
}

Add to claude_desktop_config.json, then restart Claude Desktop.

Configuration

  • Node.js >= 20.0.0 - npm >= 10.0.0 - TypeScript >= 5.3

Example prompts to try

  • Use Musubix to pattern extract.
  • Use Musubix to pattern compress.
  • Use Musubix to pattern store.

Frequently asked questions

It connects Musubix to MCP-compatible AI assistants such as Claude and Cursor, exposing 8 tools (pattern_extract, pattern_compress, pattern_store, and more) that the assistant can call on your behalf. Instead of copying data back and forth by hand, the assistant works with Musubix directly.