MCP for NeuroAgents assisting clinicians: MNE processing, EHR store, NeuroII visualization.
Neuro MCP server exists for a simple reason — assistants are far more useful when they can act on Neuro directly instead of describing what you should do. MCP for NeuroAgents assisting clinicians: MNE processing, EHR store, NeuroII visualization.
Clinician -- talks to --> Agent Researcher -- talks to --> Agent Agent -- MCP --> Server
Once Neuro is connected, these are the calls the assistant has available:
neuroii — neuroii_push_recording, neuroii_create_viz_session,The server ships on PyPI as neuro-mcp, so your MCP client can launch it on demand — there is no separate build step. Add the server block to your client's configuration, restart it, and the tools register themselves.
You will need 4 environment variables: DATABASE_URL, BIDS_ROOT, NEUROII_API_URL, NEUROII_API_TOKEN. The server will not start without them, which is usually why the tools fail to appear on a first run. Keep credentials in your client's env block or a secrets manager rather than in a file you might commit.
This sits in the developer tooling group, where several servers overlap in what they claim to do but differ sharply once you actually set them up. Neuro's toolset — neuroii — is a fair guide to whether it matches your workflow. It is maintained by AImplifier; worth a glance at recent repository activity before you build anything load-bearing on it.
This entry was verified against Neuro's own documentation before publication; SyncDev keeps the directory reviewed rather than auto-generated.
| Tool | What it does |
|---|---|
| neuroii | neuroii_push_recording, neuroii_create_viz_session, |
```json
{
"mcpServers": {
"neuro-analysis": {
"command": "/path/to/envs/neuro-mcp/bin/python",
"args": ["-m", "neuro_mcp"],
"env": { "DATABASE_URL": "sqlite:////data/neuro_mcp.db", "BIDS_ROOT": "/data/bids" }
}
}
}Configuration as documented by the project. Restart the client after saving.
| Variable | Description | Required |
|---|---|---|
| DATABASE_URL | Endpoint or connection string the server talks to. | Yes |
| BIDS_ROOT | Configuration value read at startup. | Optional |
| NEUROII_API_URL | Endpoint or connection string the server talks to. | Yes |
| NEUROII_API_TOKEN | Credential the server authenticates with. | Yes |
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