MCP Server for Enrichr gene set enrichment analysis with multi-library support
Enrichr becomes available to MCP clients through the enrichr mcp server. MCP Server for Enrichr gene set enrichment analysis with multi-library support.
A Model Context Protocol (MCP) server that provides gene set enrichment analysis using the Enrichr API. This server supports all available gene set libraries from Enrichr and returns only statistically significant results (corrected-$p$ < 0.05) for LLM tools to interpret.
suggest_libraries — Discover the most relevant Enrichr libraries for a research question. Use this before enrichr_analysis to pick the best libraries for your specific topic. Searches Enrichr's live library catalog, so it never recommenenrichr_analysis — Perform enrichment analysis across multiple Enrichr libraries in parallel.enrichment_analysis — Guided workflow for gene set enrichment analysis. Accepts a gene list and optional research context, then walks through library selection, analysis, and interpretation.Compare MCP servers by category, or browse hosted MCP servers if you prefer an endpoint over a local process.
Check the linked publisher documentation and your connected client's tool list. Names and availability can vary with the server version and account permissions.
| Tool | What it does |
|---|---|
| suggest_libraries | |
| enrichr_analysis |
{
"mcpServers": {
"enrichr-server": {
"command": "npx",
"args": [
"-y",
"enrichr-mcp-server"
]
}
}
}From the project documentation. Replace placeholders and example paths before connecting.
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