Bio MCP Server

BioMCP is a Model Context Protocol [(MCP)](https://modelcontextprotocol.io/introduction) server designed to enhance large language models with

Local serverstdioTypeScript

What is the Bio MCP Server?

BioMCP is a Model Context Protocol (MCP) server designed to enhance large language models with protein structure analysis capabilities. It provides tools for analyzing protein active sites and searching for disease-related proteins by interfacing with.

What Bio MCP does

BioMCP is a Model Context Protocol (MCP) server designed to enhance large language models with protein structure analysis capabilities. It provides tools for analyzing protein active sites and searching for disease-related proteins by interfacing with established protein databases.

Key capabilities

  • Active Site Analysis — Examine the binding sites and functional residues of proteins using PDB IDs
  • Disease-Protein Search — Find protein structures associated with specific diseases or medical conditions
  • Integrated Data Access — Connect seamlessly with RCSB Protein Data Bank (PDB)

Requirements

  • Node.js 20.0.0 or higher - TypeScript 5.0+ - Compatible MCP client implementation

Practical notes

  • Maintained by acashmoney, written in TypeScript.

More MCP options

Compare MCP servers by category, or browse hosted MCP servers if you prefer an endpoint over a local process.

Maintainer setup documentation.

How to install the Bio MCP Server

{
  "mcpServers": {
    "bio-mcp": {
      "command": "node",
      "args": [
        "/path/to/your/build/index.js"
      ]
    }
  }
}

From the project documentation. Replace placeholders and example paths before connecting.

Configuration

  • Node.js 20.0.0 or higher - TypeScript 5.0+ - Compatible MCP client implementation

Example prompts to try

  • “Use Bio MCP to Linting.”

Frequently asked questions

BioMCP is a Model Context Protocol [(MCP)](https://modelcontextprotocol.io/introduction) server designed to enhance large language models with protein structure Confirm the tools offered by your installed version in the connected client. Tool availability and permissions depend on the server and account configuration.