How do I install the azure fhir mcp server?

Use a recorded configuration for your client, replace example credential values and paths, and verify the documented runtime. Restart or reconnect the client, then inspect the available tools.

What credentials does it need?

It reads `LOG_LEVEL`, `FASTMCP_SERVER_AUTH_AZURE_BASE_URL`, `FASTMCP_SERVER_AUTH_AZURE_REDIRECT_PATH` from the environment. Store these in your client's env block or a secrets manager — never commit them to a repository — and grant the narrowest scope that still covers your use case.

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Azure Fhir MCP Server

A Model Context Protocol (MCP) server implementation for Azure Health Data Services FHIR (Fast Healthcare Interoperability Resources). This service

Local serverstdioPython

What is the Azure Fhir MCP Server?

Azure fhir mcp server connects Azure Fhir to AI assistants that speak the Model Context Protocol. A Model Context Protocol (MCP) server implementation for Azure Health Data Services FHIR (Fast Healthcare Interoperability Resources). This service provides a standardized interface for interacting with Azure FHIR servers, enabling healthcare data operations through MCP tools.

What Azure Fhir does

A Model Context Protocol (MCP) server implementation for Azure Health Data Services FHIR (Fast Healthcare Interoperability Resources). This service provides a standardized interface for interacting with Azure FHIR servers, enabling healthcare data operations through MCP tools.

Practical notes

Maintained by erikhoward, written in Python.

More MCP options

Compare MCP servers by category, or browse hosted MCP servers if you prefer an endpoint over a local process.

Maintainer setup documentation.

Recorded tools

Check the linked publisher documentation and your connected client's tool list. Names and availability can vary with the server version and account permissions.

Tool	What it does
search_fhir	Search for FHIR resources based on a dictionary of search parameters
get_user_info	(OAuth only) Returns information about the authenticated Azure user
fhir	//Medication/{id} - Access a specific Medication resource

How to install the Azure Fhir MCP Server

{
  "mcpServers": {
    "fhir": {
      "type": "stdio",
      "command": "uvx",
      "args": [
        "azure-fhir-mcp-server"
      ],
      "env": {
        "fhirUrl": "https://your-fhir-server.azurehealthcareapis.com/fhir",
        "clientId": "your-client-id",
        "clientSecret": "YOUR_clientSecret",
        "tenantId": "your-tenant-id"
      }
    }
  }
}

From the project documentation. Replace placeholders and example paths before connecting.

Configuration

Variable	Description	Required
fhirUrl	Declared in the maintainer’s client configuration.	Check documentation
clientId	Declared in the maintainer’s client configuration.	Check documentation
clientSecret	Declared in the maintainer’s client configuration.	Check documentation
tenantId	Declared in the maintainer’s client configuration.	Check documentation

Frequently asked questions

A Model Context Protocol (MCP) server implementation for Azure Health Data Services FHIR (Fast Healthcare Interoperability Resources). This service provides a Confirm the tools offered by your installed version in the connected client. Tool availability and permissions depend on the server and account configuration.