Unofficial UniProt MCP Server

A comprehensive Model Context Protocol (MCP) server providing advanced access to the UniProt protein database.

Local serverstdioTypeScript

What is the Unofficial UniProt MCP Server?

A comprehensive Model Context Protocol (MCP) server providing advanced access to the UniProt protein database.

The short version

A comprehensive Model Context Protocol (MCP) server providing advanced access to the UniProt protein database. This server offers 26 specialized bioinformatics tools enabling AI assistants and MCP clients to perform sophisticated protein research, comparative genomics, structural biology analysis, and systems biology investigations directly through UniProt's REST API.

This comprehensive UniProt MCP Server is developed by Augmented Nature, a leading innovator in AI-powered bioinformatics and computational biology solutions. Augmented Nature specializes in creating advanced tools that bridge the gap between artificial intelligence and biological research, enabling researchers to unlock deeper insights from biological data.

What it needs from you

  • Node.js (v16 or higher) - npm or yarn

More MCP options

Compare MCP servers by category, or browse hosted MCP servers if you prefer an endpoint over a local process.

Maintainer setup documentation.

Configuration

  • Node.js (v16 or higher) - npm or yarn

Example prompts to try

  • “Use Unofficial UniProt to Gene.”
  • “Use Unofficial UniProt to User-Agent.”
  • “Use Unofficial UniProt to Timeout.”

Frequently asked questions

Node.js v16 or higher and npm or yarn are required.