ChEMBL MCP Server

A comprehensive Model Context Protocol (MCP) server providing advanced access to the ChEMBL chemical database.

Local serverstdioTypeScript

What is the ChEMBL MCP Server?

A comprehensive Model Context Protocol (MCP) server providing advanced access to the ChEMBL chemical database.

The short version

A comprehensive Model Context Protocol (MCP) server providing advanced access to the ChEMBL chemical database. This server offers 22 specialized tools enabling AI assistants and MCP clients to perform sophisticated drug discovery research, chemical informatics analysis, and bioactivity investigations directly through ChEMBL's REST API.

This comprehensive ChEMBL MCP Server is developed by Augmented Nature, a leading innovator in AI-powered bioinformatics and computational chemistry solutions. Augmented Nature specializes in creating advanced tools that bridge the gap between artificial intelligence and chemical research, enabling researchers to unlock deeper insights from chemical and biological data.

What it needs from you

  • Node.js (v16 or higher) - npm or yarn

More MCP options

Compare MCP servers by category, or browse hosted MCP servers if you prefer an endpoint over a local process.

Maintainer setup documentation.

Configuration

  • Node.js (v16 or higher) - npm or yarn

Example prompts to try

  • “Use ChEMBL to InChI.”
  • “Use ChEMBL to Dose.”
  • “Use ChEMBL to Drug.”

Frequently asked questions

Node.js v16 or higher, npm or yarn, and the packages @modelcontextprotocol/sdk, axios, and typescript.